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Tandem History overview

Tandem History is a program that accepts repeat(s) in the TRF .dat file format and reconstructs duplication histories as described in [G. Benson and L. Dong, Reconstructing the Duplication History of a Tandem Repeat, Proceedings of the Seventh International Conference on Intelligent Systems for Molecular Biology (ISMB-99)]. The output is a value, HistoryR, which can be used to predict length polymorphism as reported in [F. Denoeud, G. Vergnaud and G. Benson, Predicting Human Minisatellite Polymorphism, 2002 (submitted for publication)]. This feature is also available in TRDB.

Protein Engineering