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From CAGT

Possum - submit a job


Enter DNA sequences or GenBank identifiers:
AND / OR upload sequences or identifiers from a file:
(Optional) Set subsequence From: To:
Select a bunch of cis-elements:
TATA Sp1 CRE ERE NF-1 E2F Mef-2 Myf
CCAAT AP-1 Ets Myc GATA LSF SRF Tef
AND / OR enter your own cis-elements:
(Get cis-element matrices from TRANSFAC - free registration required)
AND / OR upload cis-elements from a file:

Parameters:
(use the defaults if in doubt)
Score threshold
Residue abundance range
Assume residue abundances = 1/4
Pseudocount

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Protein Engineering