Home      Labs      Publications      People      Tools   

From CAGT

comet image

Comet Input Form

 

 

Paste a DNA sequence into the box or enter a GenBank identifier:

OR upload a DNA sequence from a file:
(Optional) Set subsequence From: To:
Choose a bunch of cis-elements:
TATA Sp1 CRE ERE NF-1 E2F Mef-2 Myf
CCAAT AP-1 Ets Myc GATA LSF SRF Tef
AND / OR enter your own cis-elements:
(Get cis-element matrices from TRANSFAC - free registration required)

AND / OR upload cis-elements from a file:
Gap parameter (average distance between motifs within a cluster):
Window size:
E-value threshold:
Pseudocount:

Protein Engineering